Activate license key | Login | Register
OpenHelix

The Arabidopsis Information Resource

Tutorial and training materials by OpenHelix

Learn to use TAIR, the primary resource for molecular and genetic information on the higher seed plant and model organism Arabidopsis thaliana. The comprehensive data set that TAIR encompasses focuses on genomic and genetic data but also contains information on publications, protocols and the Arabidopsis research community. To aid in the navigation of this vast wealth of data, TAIR provides numerous searches, sequence data, and gene information tools which allow useful information to be retrieved quickly and efficiently.
Advertisement:

You'll learn:

  • to perform basic searches and navigate several useful browsers
  • to browse genetic features within the context of the entire chromosome
  • to search detailed metabolic pathways
  • to perform nucleotide or amino acid sequence homology searches


Categories

View additional tutorials for resources in

Recent BioMed Central research articles citing this resource

Uesaka Masahiro et al., Bidirectional promoters are the major source of gene activation-associated non-coding RNAs in mammals Transcriptomic methods. BMC Genomics (2014) doi:10.1186/1471-2164-15-35

Huh Un Sung et al., APUM5, encoding a Pumilio RNA binding protein, negatively regulates abiotic stress responsive gene expression Plant-abiotic interactions. BMC Plant Biology (2014) doi:10.1186/1471-2229-14-75

Zhang Hanfeng et al., Identification, expression and interaction analyses of calcium-dependent protein kinase (CPK) genes in canola ( Brassica napus L.) Plant genomics. BMC Genomics (2014) doi:10.1186/1471-2164-15-211

Pajoro Alice et al., Dynamics of chromatin accessibility and gene regulation by MADS-domain transcription factors in flower development. Genome Biology (2014) doi:10.1186/gb-2014-15-3-r41

Martínez-López A Luis et al., Dynamics of the chili pepper transcriptome during fruit development Plant genomics. BMC Genomics (2014) doi:10.1186/1471-2164-15-143

More about the resource:

TAIR is located and maintained at the Carnegie Institution for Science, Department of Plant Biology and is funded by the National Science Foundation. TAIR is freely available to the public and contains the most accurate, up to date information and news concerning Arabidopsis thaliana. This site allows quick access to information including allele phenotypes, nucleotide and amino acid sequences, and reagent availability.


Click here for technical information on using OpenHelix tutorial and training materials

The materials and slides offered can not be resold or used for profit purposes. Reproduction, distribution and/or use is strictly limited to instructional purposes only and can not be used for for monetary gain or wide distribution.
Copyright 2009, OpenHelix, LLC.

design & development: biobyte solutions