The Arabidopsis Information Resource
Tutorial and training materials by OpenHelix
| Learn to use TAIR, the primary resource for molecular and genetic information on the higher seed plant and model organism Arabidopsis thaliana. The comprehensive data set that TAIR encompasses focuses on genomic and genetic data but also contains information on publications, protocols and the Arabidopsis research community. To aid in the navigation of this vast wealth of data, TAIR provides numerous searches, sequence data, and gene information tools which allow useful information to be retrieved quickly and efficiently. | Advertisement:
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You'll learn:
- to perform basic searches and navigate several useful browsers
- to browse genetic features within the context of the entire chromosome
- to search detailed metabolic pathways
- to perform nucleotide or amino acid sequence homology searches
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Recent BioMed Central research articles citing this resourceMehrotra Rajesh et al., Patterns and evolution of ACGT repeat cis -element landscape across four plant genomes Plant genomics. BMC Genomics (2013) doi:10.1186/1471-2164-14-203 Kundu Subrata et al., Proteomics approach combined with biochemical attributes to elucidate compatible and incompatible plant-virus interactions between Vigna mungo and Mungbean Yellow Mosaic India Virus. Proteome Science (2013) doi:10.1186/1477-5956-11-15 Gao Zhen et al., A genome-wide cis-regulatory element discovery method based on promoter sequences and gene co-expression networks Selected articles from the Eleventh Asia Pacific Bioinformatics Conference (APBC 2013): Genomics The Eleventh Asia Pacific Bioinformatics Conference (APBC 2013). BMC Genomics (2013) doi:10.1186/1471-2164-14-S1-S4 Paul Puneet et al., The protein translocation systems in plants – composition and variability on the example of Solanum lycopersicum Plant genomics. BMC Genomics (2013) doi:10.1186/1471-2164-14-189 Sampath Perumal et al., Characterization of a new high copy Stowaway family MITE, BRAMI -1 in Brassica genome Genomics and evolution. BMC Plant Biology (2013) doi:10.1186/1471-2229-13-56 |
More about the resource:
TAIR is located and maintained at the Carnegie Institution for Science, Department of Plant Biology and is funded by the National Science Foundation. TAIR is freely available to the public and contains the most accurate, up to date information and news concerning Arabidopsis thaliana. This site allows quick access to information including allele phenotypes, nucleotide and amino acid sequences, and reagent availability.
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